Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795322.1_cds_XP_016443422.1_3774
CDS Infomation

[gene=LOC107768786] [db_xref=GeneID:107768786] [protein=zinc finger CCCH domain-containing protein 17-like] [protein_id=XP_016443422.1] [location=complement(join(19691..21583,21762..21872,22937..23068))] [gbkey=CDS]
Sequence

ATGGTTGGCCCTACGCCGCCGCTGCCGCAATTGCAAACTCAGCCAACGGCACCTTCATCA
GCTGAAGATGAAGCTCTCAAGAGAAACACCGATTGTGTCTATTTTCTCGCTTCTCCTCTC
ACTTGCAAAAAGGGAAGCGAGTGTGAGTACCGCCATAGCGACATGGCTCGGCTTAATCCA
AGGGATTGCTGGTACTGGTTGAACGGAAACTGCTTAAACCCGAAGTGTGCATTCCGGCAT
CCTCCTCTTGATGGATTTTTGGAAGCTCAAGCTCCAACTGTTATAGGATCTTCTGTAGCT
CCAGTGGTGTCTGTTGCACCTATGCCACAGGGTCCTTATGCTTCTAGTAAACAAGGCGTG
CCCTGCGTATTCTTCCAGAGAGGGATTTGTTCAAAAGGTGATAAATGTGCATTCATGCAT
GCACCGAACTCCATTTCTAGCAAACCTTTACAACCTCCAGTGTCTACTGCATCTAGTGAA
ACTCCAACTGCTAAGAATGCATTTGGTGGGGTTCAAAATGCTGTGCAAGGGAAGAAACTT
CTGCAAACTAATCATCCGAAGCCCAGTGTACTACCTAAACCAGTTTGGAAACTGGAAAAT
CATCTGACTAAGAAAGAGAATACCTTTGATGAGAAGGTACTGCCACCAAATTCTGTCATA
AACAGAGAGAGTACCAGGTACAAGCCAAGTATGCCTGCAACCAATGGCAATTCGCTCAGT
GGCCCCAACAGGGTGCAGCAGCCCATTGGCCTTGATGATCACAGCAGCATGCAGAACAAG
GATGATGAAATTTCAAGAGAGCCTTCTCCTGGTTTTGATGTTCTTGTGGACGATGAGCTA
AGAGGTTCAGATTACTATCATGAGGAAGATCAGTATGGTGGAACAAGGAGCAATGGGGGG
AGAAATGAATATGACATGGGCGATTCTGCTGATTATGATTCAGTGGCAGATATTGACCGA
GATATGTACCGTGATGGGCGCGGATATGACTCATATGACAGGCTACCGAGTCGGTATGCT
TGGGAGCAGCCTATAGCTTCTTCTGAGAGAATACCAGGGGGGTCAGCTCATCTTGAAAGG
AGACGATATGGTACAGTAGATAGACCTGAACAAGTTAAAATGTCAGATCTGAGACATCGG
TTGTCGAAGCATAGGAGAGGTAATGGTTTGAAATCTGTCATTGGTCATGACTTTTCAAGT
GAAAAGAATGTTGAGGATCGAGCCAACAAGAGTTCTAGGAGGGATGCACACTATGTACCT
TCACATGATAGTTCTCTTAGTGGTCGCCTTCGAGGAAGAATAAAGCTTCCAGTTAGGTCA
TCTTCTCCGACTGACAGGGCTGAATTACGGTTGAATAGGGAAATGGATAGGGCAAGATAT
CGTGGTAGGTTGTCTTCAGAAAGGCCACAGCTGTCCTCTTACCAAGGAAGGCTTCAAGAC
AGAATAAAGGGAAGAGTGCAAGAGGATCTCAGTAATGGTGACAGAAATAACAGAGGTCCT
CGTCTAAGAAGAGATATAATAAATGACAATAATTCCAACTTTGTGCGTCCTAAAAGTCTT
GTTGAACTTAAAGGTAGGAAAACTGCGGAGAGCAATGAGCAAAATCTCAATGAGCAACAA
CACCTGGGGAAGCGCAAGTTCCAAAAGCTTGATAGTGGGGAGGATCAATCATTTGAAGGA
CCAATGTCTCTGCAAGAGATTCTGAAGAGGAAAAGAGGGGGTGGAGCTGGTATGACATCT
GGTGGGAGCGAAGACGATGAACATGAAAGAAAAGGCCAGACAGTGATGACTATTGGGAAT
GTGGTGGATTTTCCTTCTGCTATCATCAAAAATGGGTCTGGCCTTTCTATTCAGCAGGAG
GAAGAATCTAAGCTTGCTGCAGATCACCAGTCTCCTTTGTGCCGCAGTGCAAATGAACTT
GAAGCTGAAGAAGAGATGATTATGGAAGGCTCAGATGCTCAGGGCCACGACGAAGGCTAT
AATCAGGTAGATGGCGATGATGACTATGAGCCGGTTGAGGGTGAAGATTACACATTAGAG
GAAGGTGAGAACGGTGACCTTGATGACGAATACCTGGATGATGATGATGATGATGGAGAT
GACTTTGCAAAGAAGCTGGGTGTTGTTTCCTCATAA

Peptide Sequence

PEP ID

XP_016443422.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 17-like [Nicotiana tabacum]
Sequence

MVGPTPPLPQLQTQPTAPSSAEDEALKRNTDCVYFLASPLTCKKGSECEYRHSDMARLNP
RDCWYWLNGNCLNPKCAFRHPPLDGFLEAQAPTVIGSSVAPVVSVAPMPQGPYASSKQGV
PCVFFQRGICSKGDKCAFMHAPNSISSKPLQPPVSTASSETPTAKNAFGGVQNAVQGKKL
LQTNHPKPSVLPKPVWKLENHLTKKENTFDEKVLPPNSVINRESTRYKPSMPATNGNSLS
GPNRVQQPIGLDDHSSMQNKDDEISREPSPGFDVLVDDELRGSDYYHEEDQYGGTRSNGG
RNEYDMGDSADYDSVADIDRDMYRDGRGYDSYDRLPSRYAWEQPIASSERIPGGSAHLER
RRYGTVDRPEQVKMSDLRHRLSKHRRGNGLKSVIGHDFSSEKNVEDRANKSSRRDAHYVP
SHDSSLSGRLRGRIKLPVRSSSPTDRAELRLNREMDRARYRGRLSSERPQLSSYQGRLQD
RIKGRVQEDLSNGDRNNRGPRLRRDIINDNNSNFVRPKSLVELKGRKTAESNEQNLNEQQ
HLGKRKFQKLDSGEDQSFEGPMSLQEILKRKRGGGAGMTSGGSEDDEHERKGQTVMTIGN
VVDFPSAIIKNGSGLSIQQEEESKLAADHQSPLCRSANELEAEEEMIMEGSDAQGHDEGY
NQVDGDDDYEPVEGEDYTLEEGENGDLDDEYLDDDDDDGDDFAKKLGVVSS

Transcript Sequence

Gene sequence data has not been registered.